R&D Activities : R&D activities on Bioinformatics and support to other R&D activities in Biotechnology

Ph.D.Program
  • Balaji S In silico analysis and drugability of the compounds from the family Zingiberaceae
  • Traineeship:
  • The Centre has appointed two Project Trainees for a period of 12 months during 2002-2003 to develop a database of Phytophthora, the key fungal pathogen of horticultural crops.
  • The Centre has appointed two Project Trainees for a period of 6 months during 2003-2004 to develop PiperBase - a database of Piper species of India.
  • The Centre has appointed two Project Trainees for a period of 6 months during 2008-2009 to develop Spice Germplasm Database.
  • The Centre has appointed two Project Trainees for a period of 6 months during 2009-2010.
  • The Centre has appointed two Project Trainees for a period of 6 months during 2010-2011.
  • The Centre has appointed two Project Trainees for a period of 6 months during 2011-2012.
  • The Centre has appointed two Project Trainees for a period of 6 months during 2012-2013.
  • Studentship: MSC. Project Work

  • Balaji, S. (2002) Structural, computational and analytical bioinformatics of plant Chitinases. Bharathiar University, Coimbatore
  • Gandhimathi, B. (2002) Phenyl ammonia lyase informatics, Bharathiar University, Coimbatore
  • Santhi.S. (2003) Sequence and structural analysis of Phytophthora toxins, Bharathiar University, Coimbatore
  • Helna K. (2003) Database of chemical compounds and metabolic pathways in cardamom volatile oil. Karpagm Arts & Science College, Bharathiar University, Coimbatore.
  • Sajitha Varghese (2003) Molecular characterization of male, female and bisexual lines of Myristica fragrans Houtt and creation of a database for Myristica species. J.J. College of Arts and Science, Pudukkottai, Bharathidasan University,Tiruchirappalli.
  • Anila George (2003) Phenotypic characterization of Ralstonia solanacearum for biovar and its detection in soil and rhizome double antibody sandwich-ELiSA and an expert system to identify Ralstonia species. Sri Ramakrishna College of Arts and Science, Coimbatore.
  • Binoy A. M, (2003) RAPD profiling of pollu resistant lines of black pepper, J.J. College of Arts and Science, Pudukkottai, Bharathidasan University, Tiruchirappalli.
  • Remya R, (2003) Comparative molecular' profiling and quality studies of market samples of turmeric and pure turmeric sample and Curcuma species database, Karpagm Arts & Science College, Coimbatore.
  • Vinaya Varghese (2004) In silico designing of PCR primers for locating nematode resistance genes Bharatidasan University, Tiruchirappalli.
  • Britto Cathrin, B (2004) Comparative genomics of biocontrol genes present in five specie Pseudomonas. Bharatidasan University, Tiruchirappalli.
  • Siju Senan (2004) Primer designing based on the conserved sequence motifs of disease resistance genes in plants. Bharatidasan University, Tiruchirappalli.
  • Nishi Alexander (2004) Designing of primers based on promoter sequence in dicot plants. Bharatidasan University, Tiruchirappalli.
  • Sreesmitha, S (2005) Designing of species specific primers for plant growth promoting rhizobacteria (PGPR) Bacillus and Pseudomonas based on 16S rDNA polymorphism. Bharathiar University, Coimbatore.
  • Amina Shehrain (2005). Designing of species specific primers for plant parasitic nematodes Radopholus and Pratylenchus. Bharathiar University, Coimbatore, Tamil Nadu.
  • Reshma Reghu (2006) Identification of spices. Specific Signatures in Phytobacteria. Dr.G.R. Damodaran College of Science, Coimbatore
  • Lijin K.G. (2007) In Silico and In Vitro Studies on Biological Activity and Druggability of Chemical Compounds In Black Pepper ,Safi Institute of Advanced Study, Vazhayoor, Malappuram.
  • Shelvin Joseph Pereria (2007) Refining Annotation of EST sequences of Radopholus similis. Based on Structure Based Threading. Bharathiar University, Coimbatore
  • Urmila, K.J (2007) Sequence Analysis of Badna Virus Genome for identification and Classification, Periyar University, Tamil Nadu.
  • Remya. P.H (2008) Computational Analysis and Annotation of Curcuma longa (L) ESTs. Karpagam Arts Science College. Coimbatore.
  • Manjula. M.S (2008) Computational Mining of Ginger ESTs for Simple Sequence Repeats and putative genes. Karpagam Arts Science College. Coimbatore
  • Suja Sukumaran Nair (2008) In silico screening of phytochemicals from major tree spices for their biological activities. Kristu Jyoti College of Management and Technology, Mahatma Gandhi University, Kottayam
  • Manila T.M (2009) In silico identification and characterization of miRNAs in three spices using EST analysis. Kongunadu Arts and Science College, Coimbatore
  • Lakshmi Priya Darshini K (2009) In silico identification of miRNAs in Radopholus similis and development of a comprehensive database of burrowing nematodes, Karpagam Arts and Science College, Coimbatore.
  • Sangeetha R (2009) In silico screening of phytochemicals of five spices for their antimicrobial activity and docking studies using Autodock targeting Helicobacter pylori, Bharathidasan University, Thrichirapalli
  • Sruthi Mohandas. P, (2009) Functional Annotation and classification of ESTs of two Entamo-pathogenic Nematodes, Safi institute of advanced study, Malappuram
  • Nima P. Lawrence (2009) Identification of Conserved Orthologous Gene Segments in Radophulus similis Using Mitochondrial Genome and Available EST Resources, Mahatma Gandhi University.
  • Rosana O.B (2010) Virtual screening and in-vitro assay of potential drug-like inhibitors from medicinal plants against Glutathione-S-Transferase of filarial nematodes, CMS College of science and commerce, Coimbatore.
  • Keerthiga T.K.B (2010) Exploring ginger(Zingiber officale) transcriptome using expressed sequence tags(ESTs), Bharathidasan University, Thrichirapalli.
  • Sangeetha K (2010) EST based secretome analysis of burrowing nematodes (Radopholus similis), Bharathidasan University, Thrichirapalli
  • Vishnu U.S (2012) In-silico docking studies to identify potential inhibitory secondary metabolites from Pseudomonas putida against Phytophthora capsici, CMS college of Arts and Science, Coimbatore.
  • Gogula M.N (2012) In-silico Docking studies to identify nematicidal compounds from Bacillus megaterium against Radopholus similis,CMS college of Arts and Science, Coimbatore.
  • Faisal Moossa Athikkavil (2012) Functional annotation of whole genome sequence of Phytophthora isolate infecting black pepper & their in-silico protein-protein interaction studies, CMS college of Arts and Science, Coimbatore.
  • J. Jino Blessy (2012) Functional annotation of SNPs in Phytophthora capsici & their in- silico analysis to identify deleterious non-synonymous SNPs, CMS college of Arts and Science, Coimbatore.
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